Main Page

BanghamLab banghamlabwiki http://cmpdartsvr3-v.uea.ac.uk/wiki/BanghamLab/index.php/Main_Page MediaWiki 1.43.8 first-letter Media Special Talk User User talk BanghamLab BanghamLab talk File File talk MediaWiki MediaWiki talk Template Template talk Help Help talk Category Category talk Main Page 0 746 6928 6927 2014-10-27T12:03:32Z Keg06xau 9 6928 wikitext text/x-wiki =Computational biology= ---- ==[[Software#Quantitative understanding of growing shapes: GFtbox| '''Growing''']] complex biological shapes from patterns of gene expression== {| border="0" width=100% style="background-color:#000000;" |- |align="center"| [[Image:LabelledCropped GPT Snapdragon 2010-000340-0001.png|120px]] [[Image:LabelledCropped GPT Snapdragon 2010-000490-0001.png|120px]] [[Image:LabelledCropped GPT Snapdragon 2010-000570-0002.png|120px]] [[Image:LabelledCropped GPT Snapdragon 2010-000570-0007.png|120px]] [[Image:LabelledCropped GPT Snapdragon 2010-000570-0003 double.png|100px]] [[Image:LabelledCropped GPT Snapdragon 2010-000570-0002 triple.png|120px]] |} [[Software#Quantitative understanding of growing shapes: GFtbox|'''MORE''']] ==[[Software#Viewing and measuring volume images: VolViewer| '''Viewing''']] three dimensional volume (microscopy) images== {| border="0" width=100% style="background-color:#000000;" |- |align="center"| [[Image:Cs0prxz0.png|32x32px]] [[Image:Leaf_trichomes.png|50px]] [[Image:Cs0prxz0.png|50px]] [[Image:GL2_GUS.png|50px]] [[Image:Leaf5.png|50px]] [[Image:OleosinSeed.png|50px]] [[Image:OPT_Leaf_copy.png|50px]] [[Image:Seedling_copy.png|50px]] [[Image:Snapdragon_Peloric_mutant.png|50px]] [[Image:Tissue.png|50px]] [[Image:Z9r3j2yx.png|50px]] [[Image:1896_wh_txr_light.png|50px]] [[Image:Ara_flower.png|50px]] [[Image:Arableaf_ath8_OPT.png|50px]] |} [[Software#Viewing and measuring volume images: VolViewer|'''MORE''']] ==[[Software#Analysing shapes in 2D and 3D: AAMToolbox|'''Analysing''']] shapes: faces, leaves and flowers== {| border="0" width=100% style="background-color:#000000;" |- [[Image:PortraitsMEANSsmaller.jpg|800px]] |-} [[Software#Analysing shapes in 2D and 3D: AAMToolbox|'''MORE''']] Have you seen the original paintings? Do they exist?. =Algorithms= ---- ==[http://cmpdartsvr3.cmp.uea.ac.uk/wiki/BanghamLab/index.php/Software#MSERs.2C_extrema.2C_connected-set_filters_and_sieves '''Vision''':] MSER's, extrema, filter-banks, Sieves and '''Scale-space'''== {| border="0" width=100% style="background-color:#ffffff;" |- |align="center"| [[Image:Cameraman_iso_topview.jpg|300px|AAMToolbox]] [[Image:Cameraman_iso_tree.jpg|300px|AAMToolbox]] |} [[Software#MSERs.2C_extrema.2C_connected-set_filters_and_sieves|'''MORE''']] ==[http://cmpdartsvr3.cmp.uea.ac.uk/wiki/BanghamLab/index.php/Software#Art.2C_extrema_of_light_and_shade:_PhotoArtMaster '''Applications''']' of non-linear filter banks (sieves) and the art of light and shade== {| border="0" width=100% style="background-color:#ffffff;" |- |align="center"| [[Image:Colour_sieve.jpg|600px|AAMToolbox]] |} These images were produced from photographs using '''ArtMaster''' (formally known as '''PhotoArtMaster'''). The software received many favourable reviews when it was released (e.g. [http://graphicssoft.about.com/cs/photoart/gr/photoartmasterg.htm "This software can give you a lot of satisfaction from your everyday photos"], [http://graphicssoft.about.com/library/products/aafpr_photoartmaster1.htm] [http://cmpdartsvr3.cmp.uea.ac.uk/wiki/BanghamLab/index.php/Software#The_final_version_of_the_Windows_ArtMaster2.0_is_downloadable_here_with_no_support The final (so far unpublished) version of ArtMaster including code is downloadable from here.] I cannot provide support but quite of lot of documentation is available within [http://cmpdartsvr1.cmp.uea.ac.uk/downloads/software/SieveWebPages/a4a_2_screensize.pdf ''''this document''''' ] [http://cmpdartsvr3.cmp.uea.ac.uk/wiki/BanghamLab/index.php/Software#Art.2C_extrema_of_light_and_shade:_PhotoArtMaster '''MORE'''] ==[[Software#Reaction-diffusion and morphogenesis| '''Reaction-diffusion''']] and morphogenesis - the growth of shapes== {| border="0" width=100% style="background-color:#000000;" |- |align="center"| [[Image:tentacles_reaction_diffusion.png|400px]] [[Image:tentacles_morphogenesis.png|600px]] |} This image forms part of a 'journey' in the Science Museum of London's 'Journeys of Invention' [http://www.sciencemuseum.org.uk/journeys iPad app.] [[Software#Reaction-diffusion and morphogenesis|'''MORE''']] =[[Andrew personal | Andrew outside activities]] 5067wllre286kswfnpr1efxy3lf7t77